May 21, 2013
BioE Seminar (5/28): RNA Fitness Landscapes
BioE Seminar | Tuesday May 28 | 2:30 – 3:20 p.m. | Johnson Hall Room 102
The origin of life is believed to have progressed through an RNA World, in which RNA acted as both genetic material and functional molecules. Understanding early evolution requires systematic knowledge of the relationship between RNA sequence and functional activity. In particular, knowing the structure of the fitness landscape of RNA is critical to estimating the probability of the emergence of functional sequences and the role of historical accident during evolution. Much theoretical work has been devoted to fitness landscapes, but experimental maps have been relatively limited. We use in vitro selection on a pool of short RNA sequences that nearly saturates sequence space to reconstruct the form of a comprehensive fitness landscape. We also study mutations during non-enzymatic polymerization to understand how early RNA replicators would ‘move’ in sequence space.